seqfu sort

sort is one of the core subprograms of SeqFu, that allows sorting a FASTA/FASTQ file by sequence size.

Usage: sort [options] [<inputfile> ...]

 Sort sequences by size printing only unique sequences

Options:
  -p, --prefix STRING    Sequence prefix 
  -s, --strip-comments   Remove sequence comments
  --asc                  Ascending order
  -v, --verbose          Verbose output
  -h, --help             Show this help

Screenshot

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