Metaphage
What is MetaPhage
MetaPhage is a Nextflow pipeline for viromics analyses (under development, more info coming soon).
A worked tutorial
MetaPhage comes with a step-by-step tutorial that will guide the user through:
- The installation of the package
- The download of a demo dataset
- The installation of the dependencies either using Miniconda or downloading a Singularity image
- The generation of a configuration file
- The execution of the pipeline
Output report
Pipeline report: we will design a simple workflow to assemble and annotate microbial genomes
Pipeline execution introspection