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        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.11

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2021-07-05, 16:22 based on data in: /data/home/kraken049/kraken-ws/reports

        General Statistics

        Showing 8/8 rows and 4/6 columns.
        Sample Name% DuplicationGC content% PF% Adapter
        Sample13
        6.0%
        48.1%
        94.8%
        9.1%
        Sample22
        6.5%
        47.1%
        89.4%
        17.2%
        Sample25
        6.8%
        48.2%
        94.0%
        11.8%
        Sample3
        6.2%
        48.5%
        92.6%
        14.6%
        Sample30
        6.6%
        49.3%
        93.1%
        12.8%
        Sample31
        8.1%
        47.9%
        91.7%
        16.1%
        Sample4
        7.3%
        46.9%
        92.2%
        14.2%
        Sample6
        7.2%
        48.2%
        90.0%
        18.1%

        fastp

        fastp An ultra-fast all-in-one FASTQ preprocessor (QC, adapters, trimming, filtering, splitting...)

        Filtered Reads

        Filtering statistics of sampled reads.

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        Duplication Rates

        Duplication rates of sampled reads.

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        Insert Sizes

        Insert size estimation of sampled reads.

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        Sequence Quality

        Average sequencing quality over each base of all reads.

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        GC Content

        Average GC content over each base of all reads.

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        N content

        Average N content over each base of all reads.

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        MultiQC v1.11 - Written by Phil Ewels, available on GitHub.

        This report uses HighCharts, jQuery, jQuery UI, Bootstrap, FileSaver.js and clipboard.js.